JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
EMC10_chr19_50471507_50495871	0/0	t0118	8651	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0119	8649	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0120	8652	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0121	8651	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0122	8650	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0123	8653	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0124	8654	1	0	1	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0125	8651	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0126	8653	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0127	8664	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0128	8651	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0129	8649	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0130	8640	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0131	8648	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0132	8740	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0133	8650	1	0	1	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0134	8618	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0135	8649	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0136	8649	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0137	8647	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0138	8649	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0139	8651	1	0	1	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0140	8650	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0141	8648	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0142	8649	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0143	8649	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0144	8650	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0145	8611	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0146	8652	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0147	8652	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0148	8650	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0149	8651	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0150	8652	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0151	8652	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0152	8653	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0153	8651	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0154	8650	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0155	8651	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0156	8654	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0157	8654	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0158	8653	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0159	8652	1	0	1	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0160	8653	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0161	8652	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0162	8648	1	0	0	0	1	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0163	8642	1	0	0	0	0	1	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0164	8653	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0165	8653	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0166	8654	1	0	0	1	0	0	copy fasta	EMC10	chr19	50471507	50495871
EMC10_chr19_50471507_50495871	0/0	t0167	8664	1	1	0	0	0	0	copy fasta	EMC10	chr19	50471507	50495871