JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
FCN1_chr9_134898232_134922912	0/0	t0115	6605	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0116	6641	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0117	6626	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0118	6626	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0119	6620	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0120	6623	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0121	6623	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0122	6629	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0123	6608	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0124	6620	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0125	6614	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0126	6623	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0127	6623	1	0	0	0	1	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0128	6623	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/1	t0129	6608	1	0	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	1/0	t0130	6608	1	0	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0131	6608	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0132	6608	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0133	6614	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0134	6620	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0135	6620	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0136	6605	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0137	6617	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0138	6623	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0139	6602	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0140	6608	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0141	6608	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0142	6614	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0143	6620	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0144	6605	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0145	6611	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0146	6611	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0147	6623	1	1	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0148	6590	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0149	6596	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0150	6602	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0151	6602	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0152	6608	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0153	6620	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0154	6605	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0155	6590	1	1	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0156	6596	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0157	6602	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0158	6575	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0159	6608	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0160	6641	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0161	6656	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0162	6656	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0163	6666	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0164	6650	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912