JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
FCN1_chr9_134898232_134922912	0/0	t0165	6647	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0166	6650	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0167	6656	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0168	6596	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0169	6602	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0170	6680	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0171	6659	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0172	6614	1	0	0	0	1	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0173	6608	1	1	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0174	6620	1	1	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0175	6617	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0176	6650	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0177	6659	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0178	6603	1	1	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0179	6608	1	1	0	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0180	6650	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0181	6587	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0182	6644	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0183	6644	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0184	6659	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0185	6605	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0186	6611	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0187	6608	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0188	6602	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0189	6638	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0190	6653	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0191	6647	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0192	6665	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0193	6653	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0194	6650	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0195	6665	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0196	6665	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0197	6659	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0198	6650	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0199	6665	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0200	6670	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0201	6668	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0202	6650	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0203	6644	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0204	6659	1	0	0	0	0	1	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0205	6659	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0206	6647	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0207	6665	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0208	6647	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0209	6653	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0210	6650	1	0	1	0	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0211	6647	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0212	6653	1	0	0	0	1	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0213	6653	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912
FCN1_chr9_134898232_134922912	0/0	t0214	6641	1	0	0	1	0	0	copy fasta	FCN1	chr9	134898232	134922912