JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
FGF14_chr13_101705804_101921945	0/0	t0050	12325	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0051	12331	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0052	12332	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0053	12325	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0054	12339	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0055	12325	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0056	12325	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0057	12326	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0058	12334	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/1	t0059	12337	1	0	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0060	12333	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0061	12331	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0062	12329	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0063	12329	1	0	0	0	1	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0064	12325	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0065	12325	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0066	12338	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0067	12330	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0068	12342	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0069	12340	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0070	12334	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0071	12334	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0072	12332	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0073	12331	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0074	12331	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0075	12332	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0076	12332	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0077	12334	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0078	12332	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0079	12321	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0080	12347	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0081	12345	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0082	12341	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0083	12343	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0084	12329	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0085	12325	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0086	12321	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0087	12332	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0088	12329	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0089	12327	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0090	12324	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0091	12347	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0092	12330	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0093	12325	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0094	12349	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0095	12335	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0096	12346	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0097	12344	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0098	12342	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0099	12340	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945