JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
FGF14_chr13_101705804_101921945	0/0	t0100	12321	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0101	12323	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0102	12343	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0103	12327	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0104	12334	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0105	12346	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0106	12326	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0107	12333	1	0	0	0	1	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0108	12333	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0109	12329	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0110	12334	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0111	12336	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0112	12337	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0113	12334	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0114	12333	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0115	12332	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0116	12332	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0117	12332	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0118	12332	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0119	12333	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0120	12332	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0121	12332	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0122	12330	1	0	0	0	1	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0123	12330	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0124	12328	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0125	12328	1	0	0	0	0	1	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0126	12332	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0127	12317	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0128	12317	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0129	12343	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0130	12343	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0131	12341	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0132	12336	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0133	12329	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0134	12329	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0135	12329	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0136	12327	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0137	12332	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0138	12325	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0139	12323	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0140	12322	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0141	12323	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0142	12323	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0143	12320	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0144	12314	1	0	0	1	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0145	12329	1	0	1	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0146	12332	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0147	12331	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0148	12328	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945
FGF14_chr13_101705804_101921945	0/0	t0149	12328	1	1	0	0	0	0	copy fasta	FGF14	chr13	101705804	101921945