Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
AKR1C1_chr10_4958415_4988283	0/0	t0089	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0090	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0091	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0092	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0093	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0094	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0095	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0096	5572	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0097	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0098	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0099	5572	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0100	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0101	5572	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0102	5572	1	0	0	0	1	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0103	5572	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0104	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0105	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0106	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0107	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0108	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0109	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0110	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0111	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0112	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0113	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0114	5572	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0115	5572	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0116	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0117	5572	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0118	5572	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0119	5573	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0120	5573	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0121	5573	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0122	5573	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0123	5573	1	0	0	0	1	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0124	5573	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0125	5573	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0126	5573	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0127	5573	1	0	0	0	1	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0128	5573	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0129	5573	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0130	5573	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0131	5572	1	0	1	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0132	5572	1	0	0	0	0	1	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0133	5572	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0134	5573	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0135	5573	1	0	0	1	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0136	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0137	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283
AKR1C1_chr10_4958415_4988283	0/0	t0138	5572	1	1	0	0	0	0	copy fasta	AKR1C1	chr10	4958415	4988283