Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
AKR1D1_chr7_138071459_138123305	0/0	t0007	1704	11	0	2	4	0	5	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0008	1704	9	0	0	9	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0009	1704	8	0	0	8	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0010	1704	8	3	3	2	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0011	1705	7	7	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0012	1704	5	0	1	3	0	1	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0013	1704	4	4	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0014	1704	4	1	2	0	0	1	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0015	1704	4	4	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0016	1705	3	3	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0017	1704	3	3	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0018	1705	3	0	0	3	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0019	1704	3	0	0	3	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0020	1704	3	3	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0021	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0022	1704	2	0	0	0	2	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0023	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0024	1704	2	0	0	1	0	1	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0025	1704	2	0	0	2	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0026	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0027	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0028	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0029	1704	2	0	0	0	1	1	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0030	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0031	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0032	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0033	1704	2	0	0	0	0	2	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0034	1704	2	0	1	1	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0035	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0036	1704	2	2	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0037	1704	2	0	0	2	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0038	1704	1	0	0	1	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0039	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0040	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0041	1704	1	0	0	0	0	1	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0042	1704	1	0	1	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0043	1704	1	0	0	1	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0044	1704	1	0	0	1	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0045	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0046	1704	1	0	0	0	1	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0047	1684	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0048	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0049	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0050	1704	1	0	0	1	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0051	1704	1	0	1	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0052	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0053	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0054	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0055	1704	1	1	0	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305
AKR1D1_chr7_138071459_138123305	0/0	t0056	1704	1	0	1	0	0	0	copy fasta	AKR1D1	chr7	138071459	138123305