JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
GLP1R_chr6_39043781_39096303	0/0	t0055	5301	1	0	1	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0056	5303	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0057	5301	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0058	5301	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0059	5301	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0060	5301	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0061	5303	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0062	5299	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0063	5299	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0064	5299	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0065	5299	1	0	1	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0066	5295	1	0	1	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0067	5295	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0068	5297	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0069	5297	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0070	5297	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0071	5297	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0072	5297	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0073	5295	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0074	5295	1	0	0	0	1	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0075	5291	1	0	1	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0076	5291	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0077	5293	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0078	5293	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0079	5293	1	0	0	0	1	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0080	5291	1	0	1	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0081	5291	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0082	5291	1	0	0	0	1	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0083	5291	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0084	5291	1	0	0	0	1	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0085	5291	1	0	0	0	1	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0086	5291	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0087	5291	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0088	5291	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0089	5291	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0090	5291	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0091	5291	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0092	5291	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0093	5289	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0094	5289	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0095	5289	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0096	5289	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0097	5289	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0098	5289	1	0	0	0	1	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0099	5289	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0100	5287	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0101	5287	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0102	5287	1	1	0	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0103	5287	1	0	1	0	0	copy fasta	GLP1R	chr6	39043781	39096303
GLP1R_chr6_39043781_39096303	0/0	t0104	5283	1	0	0	1	0	copy fasta	GLP1R	chr6	39043781	39096303