JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
GNB5_chr15_52110100_52196392	0/0	t0052	7861	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0053	7859	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0054	7857	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0055	7862	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0056	7857	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0057	7853	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0058	7845	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0059	7833	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0060	7850	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0061	7840	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0062	7836	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0063	7847	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0064	7827	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0065	7888	1	0	0	0	1	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0066	7833	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0067	7865	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0068	7853	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0069	7856	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0070	7825	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0071	7861	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0072	7855	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0073	7840	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0074	7855	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0075	7839	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0076	7826	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0077	7825	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0078	7849	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0079	7831	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0080	7823	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0081	7824	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0082	7831	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0083	7827	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0084	7832	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0085	7826	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0086	7823	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0087	7794	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0088	7850	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0089	7841	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0090	7828	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0091	7828	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0092	7824	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0093	7820	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0094	7780	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0095	7752	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0096	7748	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0097	7821	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0098	7801	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0099	7819	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0100	7873	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0101	7800	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392