JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
GNB5_chr15_52110100_52196392	0/0	t0102	7753	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0103	7754	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0104	7751	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0105	7751	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0106	7752	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0107	7751	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0108	7751	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0109	7752	1	0	0	0	1	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0110	7734	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0111	7730	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0112	7804	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0113	7843	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0114	7821	1	0	0	0	1	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0115	7807	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0116	7847	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0117	7833	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0118	7805	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0119	7888	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0120	7747	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0121	7753	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0122	7767	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0123	7770	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0124	7758	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0125	7754	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0126	7768	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0127	7773	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0128	7830	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0129	7832	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0130	7834	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0131	7852	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0132	7848	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0133	7850	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0134	7852	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0135	7844	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0136	7848	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0137	7842	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0138	7866	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0139	7838	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0140	7850	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0141	7781	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0142	7780	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0143	7781	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0144	7780	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0145	7781	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0146	7782	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0147	7773	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0148	7781	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0149	7780	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0150	7822	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0151	7825	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392