JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
GNB5_chr15_52110100_52196392	0/0	t0152	7830	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0153	7823	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0154	7754	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	1/0	t0155	7747	1	0	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0156	7832	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0157	7829	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0158	7752	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0159	7753	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0160	7753	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0161	7754	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0162	7751	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0163	7772	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0164	7847	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0165	7838	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0166	7834	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0167	7736	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0168	7834	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0169	7831	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0170	7838	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0171	7837	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0172	7808	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0173	7833	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0174	7835	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0175	7840	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0176	7841	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0177	7838	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0178	7836	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0179	7841	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0180	7839	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0181	7835	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0182	7842	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0183	7840	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0184	7846	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0185	7836	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0186	7836	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0187	7843	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0188	7854	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0189	7823	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0190	7834	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0191	7822	1	0	0	0	0	1	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0192	7831	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0193	7827	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0194	7821	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0195	7802	1	0	0	0	1	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0196	7837	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0197	7841	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0198	7837	1	0	0	1	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0199	7828	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0200	7803	1	0	1	0	0	0	copy fasta	GNB5	chr15	52110100	52196392
GNB5_chr15_52110100_52196392	0/0	t0201	7745	1	1	0	0	0	0	copy fasta	GNB5	chr15	52110100	52196392