JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
GPR26_chr10_123661355_123702399	0/0	t0020	9291	3	0	0	3	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0021	9291	3	0	3	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0022	9288	3	1	1	0	1	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	1/0	t0023	9293	3	1	1	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0024	9292	2	2	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0025	9292	2	0	0	2	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0026	9292	2	0	0	2	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0027	9297	2	0	0	0	0	2	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0028	9293	2	0	0	2	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0029	9292	2	2	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0030	9293	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0031	9291	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0032	9291	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0033	9291	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0034	9292	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0035	9291	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0036	9255	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0037	9291	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0038	9291	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0039	9291	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0040	9291	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0041	9291	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0042	9292	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0043	9291	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0044	9290	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0045	9254	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0046	9292	1	0	1	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0047	9292	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0048	9292	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0049	9292	1	0	1	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0050	9292	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0051	9292	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0052	9292	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0053	9293	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0054	9296	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0055	9289	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0056	9291	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0057	9288	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0058	9288	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0059	9288	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0060	9288	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0061	9288	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0062	9288	1	0	1	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0063	9288	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0064	9291	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0065	9288	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0066	9292	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0067	9292	1	1	0	0	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0068	9292	1	0	0	1	0	0	copy fasta	GPR26	chr10	123661355	123702399
GPR26_chr10_123661355_123702399	0/0	t0069	9292	1	0	0	0	0	1	copy fasta	GPR26	chr10	123661355	123702399