JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
GPR35_chr2_240620480_240638159	0/0	t0038	2371	1	1	0	0	0	0	copy fasta	GPR35	chr2	240620480	240638159
GPR37L1_chr1_202117917_202138592	0/0	t0001	5083	62	2	11	37	3	9	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0002	5084	45	8	8	29	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/1	t0003	5084	36	2	20	3	5	5	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0004	5083	32	1	6	25	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0005	5083	20	0	1	15	0	4	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0006	5083	10	0	0	10	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0007	5083	9	3	2	4	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0008	5086	8	0	4	1	1	2	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0009	5083	7	7	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0010	5083	7	0	2	3	0	2	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0011	5083	7	1	2	1	1	2	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0012	5084	7	3	0	0	0	4	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0013	5083	6	0	2	4	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0014	5084	6	0	0	5	0	1	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0015	5082	5	2	2	0	1	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0016	5082	5	5	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0017	5083	5	5	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0018	5084	5	4	0	0	0	1	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0019	5084	5	5	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0020	5082	4	3	1	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0021	5083	4	1	1	2	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	1/0	t0022	5084	4	1	1	1	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0023	5084	4	3	1	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0024	5083	4	4	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0025	5085	3	3	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0026	5082	3	0	0	3	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0027	5083	3	0	0	3	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0028	5084	3	0	0	3	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0029	5084	3	0	0	3	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0030	5084	3	0	0	3	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0031	5083	3	3	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0032	5083	3	3	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0033	5084	3	3	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0034	5082	2	0	0	2	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0035	5084	2	0	0	2	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0036	5083	2	2	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0037	5083	2	0	0	2	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0038	5083	2	0	0	2	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0039	5084	2	0	0	0	2	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0040	5088	2	2	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0041	5085	2	1	0	1	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0042	5084	2	0	0	2	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0043	5083	2	2	0	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0044	5083	2	0	2	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0045	5083	2	0	1	0	0	1	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0046	5084	2	0	0	0	1	1	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0047	5084	2	0	2	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0048	5084	2	0	2	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592
GPR37L1_chr1_202117917_202138592	0/0	t0049	5084	1	0	1	0	0	0	copy fasta	GPR37L1	chr1	202117917	202138592