JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
GREM1_chr15_32713004_32750106	0/0	t0067	14025	2	0	0	2	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0068	14027	2	0	0	2	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0069	14026	2	0	0	1	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0070	14024	2	0	0	0	2	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0071	14024	2	0	0	2	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0072	14025	2	0	0	2	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0073	14037	2	0	0	2	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0074	14014	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0075	14009	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0076	14018	1	0	0	1	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0077	14025	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0078	14025	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0079	14024	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0080	14042	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0081	14013	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0082	14036	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0083	14040	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0084	14036	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0085	14026	1	0	0	0	1	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0086	14010	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0087	14025	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0088	14031	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0089	14031	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0090	14036	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0091	14010	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0092	14025	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0093	14015	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0094	14015	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0095	14014	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0096	14013	1	0	0	0	1	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0097	14014	1	0	0	0	1	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0098	14014	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0099	14024	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0100	14015	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0101	14011	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0102	14026	1	0	0	1	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0103	14040	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0104	14038	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0105	14037	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0106	14037	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0107	14036	1	0	1	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0108	14020	1	0	0	1	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0109	14024	1	0	0	1	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0110	14025	1	0	0	1	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0111	14025	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0112	14026	1	0	0	0	0	1	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0113	14019	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0114	14026	1	0	0	1	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0115	14018	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106
GREM1_chr15_32713004_32750106	0/0	t0116	14017	1	1	0	0	0	0	copy fasta	GREM1	chr15	32713004	32750106