JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
HEATR6_chr17_60036008_60083921	0/0	t0033	2490	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0034	2417	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0035	2343	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0036	2307	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0037	2268	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0038	2638	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0039	2635	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0040	2526	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0041	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0042	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0043	2600	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0044	2415	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0045	2526	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0046	2563	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0047	2637	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0048	2711	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0049	2526	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0050	2785	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0051	2563	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0052	2563	1	0	0	0	1	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0053	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0054	2637	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0055	2674	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0056	2637	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0057	2600	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0058	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0059	2526	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0060	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0061	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0062	2563	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0063	2563	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0064	2711	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0065	2748	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0066	2748	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0067	2748	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0068	2859	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0069	2711	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0070	2748	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0071	2785	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0072	2748	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0073	2674	1	0	0	1	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0074	2120	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0075	2490	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0076	2600	1	0	0	0	1	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0077	2636	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0078	2451	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0079	2341	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0080	2378	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0081	2415	1	0	1	0	0	copy fasta	HEATR6	chr17	60036008	60083921
HEATR6_chr17_60036008_60083921	0/0	t0082	2452	1	1	0	0	0	copy fasta	HEATR6	chr17	60036008	60083921