JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
INSR_chr19_7107265_7299414	0/0	t0033	5322	2	0	2	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0034	5322	2	1	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0035	5322	2	1	1	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0036	5324	2	0	0	1	1	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0037	5325	2	0	2	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0038	5326	2	0	0	0	2	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0039	5325	2	0	0	2	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0040	5316	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0041	5323	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0042	5330	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0043	5329	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0044	5313	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0045	5323	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0046	5322	1	0	1	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0047	5323	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0048	5324	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0049	5325	1	0	1	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0050	5325	1	0	0	0	1	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0051	5316	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0052	5314	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0053	5314	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0054	5314	1	0	1	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0055	5315	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0056	5322	1	0	0	0	1	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0057	5321	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0058	5321	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0059	5324	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0060	5321	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0061	5322	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0062	5322	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0063	5322	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0064	5323	1	0	1	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0065	5325	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0066	5323	1	0	0	0	1	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0067	5326	1	0	0	0	1	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0068	5326	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0069	5325	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0070	5322	1	0	0	0	1	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0071	5318	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0072	5314	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0073	5322	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0074	5325	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0075	5317	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0076	5320	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0077	5315	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0078	5325	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0079	5324	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0080	5325	1	0	0	1	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0081	5315	1	1	0	0	0	copy fasta	INSR	chr19	7107265	7299414
INSR_chr19_7107265_7299414	0/0	t0082	5317	1	0	1	0	0	copy fasta	INSR	chr19	7107265	7299414