JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
KCNE3_chr11_74449841_74472549	0/0	t0030	2763	3	0	3	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0031	2755	3	3	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0032	2753	3	3	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0033	2751	3	3	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0034	2752	2	0	1	0	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0035	2763	2	0	0	2	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0036	2745	2	0	0	0	0	2	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0037	2751	2	0	0	0	0	2	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0038	2751	2	2	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0039	2753	2	1	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0040	2749	2	2	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0041	2781	2	0	0	1	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0042	2774	2	2	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0043	2766	2	0	0	2	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0044	2754	2	2	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0045	2751	2	0	0	2	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0046	2780	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0047	2751	1	0	0	0	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0048	2777	1	0	0	0	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0049	2765	1	0	0	0	1	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0050	2753	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0051	2748	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0052	2748	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0053	2751	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0054	2754	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0055	2752	1	0	0	0	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0056	2751	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0057	2751	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0058	2753	1	0	1	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0059	2747	1	0	1	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0060	2752	1	0	1	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0061	2767	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0062	2768	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0063	2805	1	0	0	0	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0064	2789	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0065	2787	1	0	1	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0066	2772	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0067	2772	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0068	2768	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0069	2765	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0070	2754	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0071	2747	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0072	2745	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0073	2745	1	0	0	0	0	1	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0074	2753	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0075	2748	1	0	0	1	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0076	2752	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE3_chr11_74449841_74472549	0/0	t0077	2752	1	1	0	0	0	0	copy fasta	KCNE3	chr11	74449841	74472549
KCNE4_chr2_223047190_223060637	0/0	t0001	2404	269	51	38	146	8	26	copy fasta	KCNE4	chr2	223047190	223060637
KCNE4_chr2_223047190_223060637	1/0	t0002	2403	26	9	4	5	0	7	copy fasta	KCNE4	chr2	223047190	223060637