JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
KLHL36_chr16_84643511_84672686	0/0	t0047	5708	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0048	5709	1	0	1	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0049	5709	1	0	1	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0050	5719	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0051	5709	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0052	5719	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0053	5709	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0054	5709	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0055	5709	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0056	5719	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0057	5718	1	0	1	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0058	5718	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0059	5709	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0060	5705	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0061	5705	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0062	5716	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0063	5707	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0064	5716	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0065	5706	1	0	1	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0066	5706	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0067	5717	1	0	1	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0068	5706	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0069	5717	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0070	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0071	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0072	5718	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0073	5718	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0074	5718	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0075	5718	1	0	0	0	1	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0076	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0077	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0078	5719	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0079	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0080	5708	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0081	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0082	5709	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0083	5720	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0084	5720	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0085	5710	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0086	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0087	5709	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0088	5718	1	0	0	0	1	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0089	5718	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0090	5718	1	0	0	0	1	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0091	5709	1	0	0	1	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0092	5719	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0093	5716	1	0	0	0	1	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0094	5719	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0095	5719	1	0	1	0	0	copy fasta	KLHL36	chr16	84643511	84672686
KLHL36_chr16_84643511_84672686	0/0	t0096	5719	1	1	0	0	0	copy fasta	KLHL36	chr16	84643511	84672686