| regionname | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
thapid | tlen | total | AFR | AMR | EAS | EUR | SAS | tseq | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
0/0 | t0006 | 441 | 17 | 2 | 1 | 14 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
1/0 | t0007 | 441 | 15 | 11 | 1 | 0 | 1 | 1 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0008 | 442 | 14 | 0 | 3 | 5 | 0 | 6 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0009 | 441 | 13 | 6 | 4 | 0 | 1 | 2 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/1 | t0010 | 441 | 12 | 3 | 3 | 1 | 0 | 4 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0011 | 440 | 10 | 6 | 0 | 4 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0012 | 439 | 9 | 2 | 0 | 6 | 0 | 1 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0013 | 441 | 9 | 9 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0014 | 441 | 8 | 3 | 2 | 0 | 0 | 3 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0015 | 441 | 7 | 2 | 1 | 1 | 0 | 3 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0016 | 440 | 5 | 5 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0017 | 439 | 5 | 5 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0018 | 439 | 4 | 4 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0019 | 440 | 3 | 1 | 2 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0020 | 440 | 3 | 0 | 0 | 3 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0021 | 441 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0022 | 441 | 2 | 0 | 0 | 2 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0023 | 439 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0024 | 439 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0025 | 441 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0026 | 441 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0027 | 441 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0028 | 439 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0029 | 440 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0030 | 440 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0031 | 439 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0032 | 441 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0033 | 440 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0034 | 441 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0035 | 441 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/0 | t0036 | 442 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | MAP1LC3B2 | chr12 | 116554381 | 116581606 |
|
0/1 | t0001 | 1770 | 187 | 8 | 38 | 95 | 11 | 34 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0002 | 1770 | 82 | 7 | 18 | 53 | 2 | 2 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0003 | 1770 | 28 | 25 | 2 | 0 | 0 | 1 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0004 | 1770 | 21 | 0 | 3 | 18 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0005 | 1770 | 13 | 11 | 2 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0006 | 1767 | 10 | 0 | 9 | 1 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0007 | 1770 | 8 | 7 | 1 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0008 | 1770 | 8 | 7 | 1 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0009 | 1768 | 7 | 0 | 0 | 7 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0010 | 1770 | 6 | 6 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0011 | 1768 | 5 | 5 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0012 | 1770 | 5 | 1 | 1 | 0 | 2 | 1 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
1/0 | t0013 | 1770 | 5 | 4 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0014 | 1770 | 5 | 0 | 2 | 0 | 1 | 2 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0015 | 1770 | 4 | 4 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0016 | 1770 | 3 | 3 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0017 | 1770 | 3 | 0 | 3 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0018 | 1770 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |
|
0/0 | t0019 | 1770 | 2 | 0 | 0 | 2 | 0 | 0 | copy fasta | MAP1LC3B | chr16 | 87387336 | 87409774 |