JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
METTL22_chr16_8616698_8654654	0/0	t0019	3759	2	2	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0020	3758	2	2	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0021	3759	2	0	1	0	1	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0022	3759	2	0	0	2	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0023	3760	2	0	0	2	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0024	3759	2	2	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0025	3762	2	2	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0026	3760	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0027	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0028	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0029	3758	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0030	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0031	3760	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0032	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0033	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0034	3759	1	0	0	0	0	1	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0035	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0036	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0037	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0038	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0039	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0040	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0041	3762	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0042	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0043	3760	1	0	1	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0044	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0045	3759	1	0	0	1	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0046	3759	1	0	1	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0047	3759	1	0	0	0	0	1	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0048	3760	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0049	3759	1	0	0	0	1	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0050	3759	1	0	1	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0051	3760	1	0	0	0	0	1	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0052	3759	1	0	0	0	0	1	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0053	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0054	3759	1	0	1	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0055	3759	1	0	1	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL22_chr16_8616698_8654654	0/0	t0056	3759	1	1	0	0	0	0	copy fasta	METTL22	chr16	8616698	8654654
METTL23_chr17_76721839_76738880	1/1	t0001	556	393	84	64	187	16	40	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0002	556	7	7	0	0	0	0	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0003	556	5	4	1	0	0	0	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0004	556	2	0	2	0	0	0	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0005	556	2	0	0	0	0	2	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0006	556	1	0	0	1	0	0	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0007	556	1	0	1	0	0	0	copy fasta	METTL23	chr17	76721839	76738880
METTL23_chr17_76721839_76738880	0/0	t0008	556	1	1	0	0	0	0	copy fasta	METTL23	chr17	76721839	76738880
METTL24_chr6_110238940_110363349	1/1	t0001	2084	80	3	25	42	0	8	copy fasta	METTL24	chr6	110238940	110363349
METTL24_chr6_110238940_110363349	0/0	t0002	2088	41	20	3	18	0	0	copy fasta	METTL24	chr6	110238940	110363349
METTL24_chr6_110238940_110363349	0/0	t0003	2084	16	0	0	16	0	0	copy fasta	METTL24	chr6	110238940	110363349
METTL24_chr6_110238940_110363349	0/0	t0004	2084	13	7	1	1	0	4	copy fasta	METTL24	chr6	110238940	110363349