JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MOB3A_chr19_2066036_2101326	0/0	t0007	2734	6	6	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0008	2734	4	4	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0009	2734	3	0	0	0	0	3	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0010	2734	3	0	0	3	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0011	2731	3	3	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0012	2734	3	0	0	0	2	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0013	2734	3	0	1	0	1	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0014	2734	2	1	1	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0015	2734	2	0	2	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0016	2734	2	2	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0017	2734	2	0	0	2	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0018	2734	1	0	0	0	0	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0019	2734	1	1	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0020	2734	1	0	0	0	0	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0021	2734	1	1	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0022	2734	1	0	0	0	0	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0023	2734	1	1	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0024	2734	1	1	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0025	2734	1	0	0	0	0	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0026	2734	1	0	0	1	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0027	2734	1	1	0	0	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0028	2734	1	0	0	0	1	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0029	2734	1	0	0	1	0	0	copy fasta	MOB3A	chr19	2066036	2101326
MOB3A_chr19_2066036_2101326	0/0	t0030	2734	1	0	0	0	0	1	copy fasta	MOB3A	chr19	2066036	2101326
MOB3B_chr9_27320209_27534814	0/0	t0001	5837	13	1	6	3	2	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0002	5837	8	0	4	3	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0003	5837	6	0	5	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0004	5836	5	1	1	3	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0005	5839	5	0	0	5	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0006	5836	4	0	0	3	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0007	5836	4	0	1	0	0	3	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0008	5838	4	0	1	2	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0009	5837	3	0	1	0	2	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0010	5837	3	1	1	0	1	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0011	5838	3	0	0	1	0	2	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0012	5837	3	1	0	2	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0013	5837	3	0	0	3	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0014	5838	3	0	0	3	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0015	5837	3	0	0	2	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0016	5837	2	0	2	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0017	5837	2	0	2	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0018	5837	2	0	0	1	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0019	5836	2	0	2	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0020	5839	2	0	0	2	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0021	5836	2	0	0	0	0	2	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0022	5837	2	2	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0023	5837	2	2	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0024	5837	2	0	2	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0025	5837	2	0	2	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0026	5837	2	2	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814