JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MOB3B_chr9_27320209_27534814	0/0	t0177	5839	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0178	5837	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0179	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0180	5837	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0181	5839	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0182	5838	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0183	5837	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0184	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0185	5837	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0186	5837	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0187	5838	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0188	5839	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0189	5836	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0190	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0191	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0192	5836	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0193	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0194	5837	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0195	5836	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0196	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0197	5837	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0198	5836	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0199	5837	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0200	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0201	5836	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0202	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0203	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0204	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0205	5838	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0206	5837	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0207	5836	1	0	0	0	1	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0208	5837	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0209	5836	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0210	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0211	5837	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0212	5836	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0213	5836	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0214	5839	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0215	5837	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0216	5836	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0217	5836	1	0	1	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0218	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0219	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0220	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0221	5837	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0222	5837	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0223	5836	1	0	0	0	0	1	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0224	5839	1	1	0	0	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0225	5838	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814
MOB3B_chr9_27320209_27534814	0/0	t0226	5840	1	0	0	1	0	0	copy fasta	MOB3B	chr9	27320209	27534814