JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MOCOS_chr18_36182497_36277157	0/0	t0039	3520	2	0	0	2	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0040	3519	2	0	0	2	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0041	3518	2	1	0	0	0	1	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0042	3517	2	2	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0043	3520	2	2	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0044	3516	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0045	3517	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0046	3516	1	0	0	0	0	1	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0047	3516	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0048	3516	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0049	3515	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0050	3516	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0051	3521	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0052	3517	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0053	3520	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0054	3518	1	0	0	0	0	1	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0055	3520	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0056	3521	1	0	0	0	0	1	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0057	3521	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0058	3521	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0059	3520	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0060	3519	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0061	3519	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0062	3517	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0063	3519	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0064	3518	1	0	0	0	0	1	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0065	3520	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0066	3518	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0067	3521	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0068	3518	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0069	3513	1	0	0	0	0	1	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0070	3518	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0071	3517	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0072	3520	1	0	0	0	1	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0073	3521	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0074	3518	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0075	3521	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0076	3520	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0077	3519	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0078	3521	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0079	3519	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0080	3518	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0081	3518	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/1	t0082	3517	1	0	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0083	3520	1	0	0	1	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0084	3502	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0085	3521	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0086	3521	1	1	0	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCOS_chr18_36182497_36277157	0/0	t0087	3520	1	0	1	0	0	0	copy fasta	MOCOS	chr18	36182497	36277157
MOCS1_chr6_39899170_39939462	1/1	t0001	2233	138	36	28	38	9	25	copy fasta	MOCS1	chr6	39899170	39939462