JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MYO10_chr5_16656907_16941288	0/0	t0016	5274	3	0	2	0	1	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	1/0	t0017	5266	3	2	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0018	5276	3	1	0	2	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0019	5273	3	0	0	3	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0020	5267	3	2	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0021	5251	2	0	2	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0022	5286	2	0	0	2	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0023	5284	2	1	0	0	0	1	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0024	5282	2	0	2	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0025	5281	2	2	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0026	5278	2	2	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0027	5278	2	1	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0028	5277	2	1	0	0	0	1	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0029	5277	2	0	0	2	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0030	5275	2	0	0	2	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0031	5274	2	0	1	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0032	5272	2	1	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0033	5272	2	1	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0034	5273	2	0	0	2	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0035	5254	2	0	2	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0036	5250	2	2	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0037	5281	2	2	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0038	5276	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0039	5254	1	0	0	0	0	1	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0040	5247	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0041	5283	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0042	5280	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0043	5277	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0044	5269	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0045	5269	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0046	5266	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0047	5271	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0048	5267	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0049	5283	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0050	5256	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0051	5269	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0052	5276	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0053	5287	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0054	5286	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0055	5284	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0056	5287	1	0	0	0	0	1	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0057	5286	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0058	5276	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0059	5265	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0060	5250	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0061	5252	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0062	5251	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0063	5256	1	0	0	0	0	1	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0064	5248	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0065	5245	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288