JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MYO10_chr5_16656907_16941288	0/0	t0116	5261	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0117	5267	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0118	5276	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0119	5275	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0120	5252	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0121	5276	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0122	5274	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0123	5272	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0124	5259	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0125	5266	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0126	5273	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0127	5260	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0128	5258	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0129	5277	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0130	5276	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0131	5279	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0132	5254	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0133	5254	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0134	5263	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0135	5254	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0136	5253	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0137	5253	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0138	5252	1	0	1	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0139	5248	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0140	5252	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0141	5270	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0142	5269	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0143	5275	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0144	5254	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0145	5252	1	0	0	1	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0146	5272	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0147	5273	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0148	5270	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0149	5275	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0150	5274	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0151	5266	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0152	5277	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0153	5264	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0154	5254	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0155	5248	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0156	5246	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0157	5266	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0158	5271	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0159	5281	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0160	5281	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0161	5267	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO10_chr5_16656907_16941288	0/0	t0162	5272	1	1	0	0	0	0	copy fasta	MYO10	chr5	16656907	16941288
MYO15A_chr17_18103756_18184800	0/0	t0001	1219	123	37	16	59	2	9	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	t0002	1219	72	25	16	26	1	4	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	1/0	t0003	1219	44	2	10	28	0	3	copy fasta	MYO15A	chr17	18103756	18184800