JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MYO1E_chr15_59127434_59377871	1/0	t0010	5318	3	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0011	5318	3	3	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0012	5300	3	0	1	0	2	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0013	5307	3	3	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0014	5318	3	0	0	3	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0015	5318	3	1	2	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0016	5322	3	0	1	1	0	1	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0017	5318	2	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0018	5318	2	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0019	5321	2	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0020	5318	2	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0021	5300	2	1	1	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0022	5300	2	0	2	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0023	5305	2	0	0	2	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0024	5318	2	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0025	5329	2	2	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0026	5318	1	0	0	0	0	1	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0027	5300	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0028	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0029	5321	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0030	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0031	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0032	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0033	5345	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0034	5318	1	0	0	0	0	1	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0035	5318	1	0	0	0	1	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0036	5307	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0037	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0038	5300	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0039	5318	1	0	1	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0040	5318	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0041	5300	1	0	0	0	1	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0042	5300	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0043	5300	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0044	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0045	5300	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0046	5300	1	0	1	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0047	5318	1	0	0	0	0	1	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0048	5318	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0049	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0050	5318	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0051	5329	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0052	5304	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0053	5321	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0054	5300	1	0	1	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0055	5318	1	0	0	0	1	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0056	5318	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0057	5322	1	0	0	1	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1E_chr15_59127434_59377871	0/0	t0058	5321	1	1	0	0	0	0	copy fasta	MYO1E	chr15	59127434	59377871
MYO1F_chr19_8515778_8582442	0/0	t0001	885	112	31	22	46	3	10	copy fasta	MYO1F	chr19	8515778	8582442