JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MYO6_chr6_75744239_75924537	0/0	t0006	4757	11	0	2	5	3	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/1	t0007	4757	11	0	2	3	2	3	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0008	4754	9	1	1	4	1	2	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0009	4756	8	0	0	8	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0010	4757	7	0	1	5	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0011	4754	7	1	1	5	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0012	4757	5	0	0	3	1	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0013	4754	5	0	0	4	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0014	4755	5	5	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0015	4758	5	5	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0016	4757	4	4	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0017	4758	4	4	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0018	4756	4	0	0	4	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0019	4757	4	0	0	4	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0020	4757	4	0	1	0	2	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0021	4757	3	0	0	3	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0022	4757	3	3	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0023	4753	3	3	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0024	4757	3	2	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0025	4753	3	3	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0026	4757	3	0	0	3	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0027	4754	3	1	0	1	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0028	4756	3	0	0	3	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0029	4757	3	1	1	0	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0030	4757	2	0	1	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0031	4757	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0032	4757	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0033	4757	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0034	4755	2	0	0	1	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0035	4757	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0036	4758	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0037	4757	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0038	4758	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0039	4758	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0040	4757	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0041	4757	2	0	2	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0042	4757	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0043	4756	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0044	4753	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0045	4756	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0046	4756	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0047	4756	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0048	4756	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0049	4757	2	0	0	2	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0050	4753	2	2	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0051	4758	2	0	2	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0052	4758	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0053	4758	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0054	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0055	4754	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537