JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MYO6_chr6_75744239_75924537	0/0	t0106	4755	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0107	4758	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0108	4758	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0109	4757	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0110	4757	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0111	4757	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0112	4757	1	0	0	0	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0113	4758	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0114	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0115	4753	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0116	4758	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0117	4757	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0118	4753	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0119	4756	1	0	0	0	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0120	4756	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0121	4756	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0122	4756	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0123	4756	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0124	4756	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0125	4756	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0126	4756	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0127	4756	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0128	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0129	4758	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0130	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0131	4757	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0132	4754	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0133	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0134	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0135	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0136	4757	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0137	4757	1	0	1	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0138	4754	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0139	4757	1	0	0	0	1	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0140	4754	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0141	4757	1	0	0	1	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0142	4757	1	0	0	0	0	1	copy fasta	MYO6	chr6	75744239	75924537
MYO6_chr6_75744239_75924537	0/0	t0143	4757	1	1	0	0	0	0	copy fasta	MYO6	chr6	75744239	75924537
MYO7A_chr11_77123246_77220241	1/1	t0001	836	333	81	67	142	10	31	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0002	836	9	1	4	0	3	1	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0003	836	5	2	2	0	1	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0004	836	4	4	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0005	836	2	1	1	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0006	836	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0007	836	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7A_chr11_77123246_77220241	0/0	t0008	836	1	1	0	0	0	0	copy fasta	MYO7A	chr11	77123246	77220241
MYO7B_chr2_127530683_127642726	1/1	t0001	482	242	71	59	68	9	33	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	t0002	482	20	4	4	9	0	3	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	t0003	482	12	4	3	1	2	2	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	t0004	482	4	4	0	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726