JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
MYO7B_chr2_127530683_127642726	0/0	t0005	482	1	1	0	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	t0006	482	1	0	0	0	1	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	t0007	482	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	t0008	482	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO9A_chr15_71817291_72123150	0/1	t0001	4832	93	20	22	39	2	9	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0002	4838	43	0	6	34	0	3	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0003	4835	30	0	0	29	1	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0004	4838	14	5	6	0	0	3	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0005	4831	13	11	1	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0006	4839	10	0	1	9	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0007	4833	9	0	1	8	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0008	4834	7	3	4	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0009	4833	6	0	0	6	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0010	4836	5	0	0	5	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0011	4818	5	5	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0012	4836	4	1	3	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0013	4818	4	2	2	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0014	4832	3	3	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0015	4843	3	1	1	0	1	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0016	4839	3	0	1	0	1	1	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0017	4842	3	0	2	0	0	1	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0018	4830	3	3	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0019	4832	3	3	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0020	4832	2	2	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0021	4835	2	2	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0022	4830	2	2	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0023	4838	2	0	0	1	0	1	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0024	4834	2	2	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0025	4838	1	0	1	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0026	4832	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0027	4835	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0028	4833	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0029	4839	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0030	4832	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0031	4837	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0032	4832	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0033	4836	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0034	4832	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0035	4835	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0036	4835	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0037	4818	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0038	4840	1	0	0	0	1	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0039	4838	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0040	4839	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0041	4839	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0042	4838	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0043	4838	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0044	4838	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0045	4838	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	t0046	4838	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150