JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
NAP1L1_chr12_76031585_76089685	0/0	t0032	11984	2	0	0	1	0	1	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0033	11985	2	0	0	2	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0034	11986	2	0	0	2	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0035	11985	2	0	0	2	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0036	11987	2	0	2	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0037	11985	2	1	0	0	0	1	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0038	11986	2	2	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0039	11985	2	2	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0040	11986	2	2	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0041	11974	2	1	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0042	11986	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0043	11986	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0044	11986	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0045	11988	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0046	11968	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0047	11986	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0048	11987	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0049	11987	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0050	11987	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0051	11986	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0052	11985	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0053	11986	1	0	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0054	11987	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0055	11987	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0056	11984	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0057	11985	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0058	11984	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0059	11984	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0060	11984	1	0	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0061	11986	1	0	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0062	11984	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0063	11985	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0064	11984	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0065	11941	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0066	11985	1	0	0	0	0	1	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0067	11982	1	0	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0068	11985	1	0	0	0	1	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0069	11987	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0070	11986	1	0	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0071	11973	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0072	11986	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0073	11988	1	1	0	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0074	11972	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0075	11972	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0076	11986	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0077	11985	1	0	1	0	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0078	11985	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0079	11987	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0080	11987	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685
NAP1L1_chr12_76031585_76089685	0/0	t0081	11985	1	0	0	1	0	0	copy fasta	NAP1L1	chr12	76031585	76089685