JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
NBPF8_chr1_120410035_120474676	0/0	t0022	4432	2	0	0	2	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0023	4428	2	0	2	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0024	4428	2	0	0	0	0	2	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0025	4428	2	0	2	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0026	4430	2	2	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0027	4430	2	0	2	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0028	4428	2	0	0	2	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0029	4428	2	1	1	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0030	4430	2	2	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0031	4428	2	2	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0032	4428	2	2	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0033	4428	1	0	1	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0034	4428	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0035	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0036	4430	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0037	4430	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0038	4428	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0039	4428	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0040	4430	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0041	4430	1	0	1	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0042	4430	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0043	4430	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0044	4428	1	0	1	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0045	4428	1	0	0	0	0	1	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0046	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0047	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0048	4430	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0049	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0050	4430	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0051	4432	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0052	4428	1	0	1	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0053	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0054	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0055	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0056	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0057	4428	1	0	0	0	0	1	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0058	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0059	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0060	4430	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0061	4432	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0062	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0063	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0064	4430	1	0	0	0	1	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0065	4428	1	1	0	0	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0066	4428	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0067	4428	1	0	0	0	0	1	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0068	4428	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF8_chr1_120410035_120474676	0/0	t0069	4428	1	0	0	1	0	0	copy fasta	NBPF8	chr1	120410035	120474676
NBPF9_chr1_149047186_149108551	0/0	t0001	4556	62	0	4	54	0	4	copy fasta	NBPF9	chr1	149047186	149108551
NBPF9_chr1_149047186_149108551	0/0	t0002	4565	48	18	17	6	2	5	copy fasta	NBPF9	chr1	149047186	149108551