Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ARL10_chr5_176360487_176386909	0/0	t0098	10090	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0099	10095	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0100	10090	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0101	10096	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0102	10111	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0103	10110	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0104	10107	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0105	10096	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0106	10106	1	0	0	0	1	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0107	10108	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0108	10112	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0109	10111	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0110	10102	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0111	10103	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0112	10103	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0113	10109	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0114	10107	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0115	10110	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0116	10109	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0117	10109	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0118	10110	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0119	10107	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0120	10107	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0121	10107	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0122	10106	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0123	10107	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0124	10110	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0125	10112	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0126	10113	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0127	10110	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0128	10112	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0129	10110	1	0	0	0	1	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0130	10086	1	0	0	0	1	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0131	10099	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0132	10110	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0133	10103	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0134	10105	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0135	10103	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0136	10084	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0137	10104	1	0	0	0	1	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0138	10114	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0139	10107	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0140	10067	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0141	10101	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0142	10102	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0143	10086	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0144	10094	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0145	10091	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0146	10091	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0147	10090	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909