Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ARL10_chr5_176360487_176386909	0/0	t0148	10090	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0149	10098	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0150	10097	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0151	10098	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0152	10101	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0153	10102	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0154	10101	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0155	10098	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0156	10099	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0157	10105	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0158	10093	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	1/0	t0159	10092	1	0	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0160	10058	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0161	10058	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0162	10062	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0163	10062	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0164	10062	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0165	10062	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0166	10060	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0167	10058	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0168	10057	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0169	10058	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0170	10058	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0171	10054	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0172	10054	1	0	0	0	1	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0173	10055	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0174	10070	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0175	10071	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0176	10094	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0177	10105	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0178	10105	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0179	10093	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0180	10087	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0181	10095	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0182	10094	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0183	10094	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0184	10093	1	0	0	0	0	1	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0185	10094	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0186	10093	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0187	10094	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0188	10094	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0189	10098	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0190	10098	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0191	10097	1	0	0	0	1	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0192	10098	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0193	10097	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0194	10101	1	0	0	1	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0195	10093	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0196	10106	1	0	1	0	0	0	copy fasta	ARL10	chr5	176360487	176386909
ARL10_chr5_176360487_176386909	0/0	t0197	10112	1	1	0	0	0	0	copy fasta	ARL10	chr5	176360487	176386909