JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
NFIB_chr9_14076848_14319141	0/0	t0051	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	1/0	t0052	7092	1	0	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0053	7093	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0054	7092	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0055	7092	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0056	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0057	7086	1	0	0	0	1	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0058	7087	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0059	7087	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0060	7089	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0061	7092	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0062	7090	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0063	7093	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0064	7094	1	0	0	0	1	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0065	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0066	7092	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0067	7092	1	0	0	0	1	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0068	7091	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0069	7095	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0070	7095	1	0	0	0	1	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0071	7091	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0072	7091	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0073	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0074	7092	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0075	7091	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0076	7090	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0077	7092	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0078	7090	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0079	7093	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0080	7092	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0081	7093	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0082	7092	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0083	7093	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0084	7094	1	0	0	0	1	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0085	7092	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0086	7094	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0087	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0088	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0089	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0090	7089	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0091	7091	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0092	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0093	7090	1	0	0	0	1	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0094	7092	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0095	7092	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0096	7094	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0097	7093	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0098	7094	1	0	1	0	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0099	7091	1	0	0	1	0	copy fasta	NFIB	chr9	14076848	14319141
NFIB_chr9_14076848_14319141	0/0	t0100	7092	1	1	0	0	0	copy fasta	NFIB	chr9	14076848	14319141