Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ARMC10_chr7_103070140_103104759	0/0	t0023	1382	4	2	0	1	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0024	1378	4	4	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0025	1375	3	1	0	1	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0026	1370	3	0	1	1	1	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0027	1366	3	1	0	2	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0028	1375	3	3	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0029	1373	3	0	2	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0030	1369	3	0	3	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0031	1380	3	3	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/1	t0032	1376	3	0	1	0	1	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0033	1378	2	0	2	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0034	1374	2	0	0	0	0	2	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0035	1390	2	1	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0036	1386	2	0	0	2	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0037	1379	2	0	1	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0038	1377	2	0	2	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0039	1375	2	0	0	2	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0040	1373	2	0	1	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0041	1371	2	0	0	2	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0042	1362	2	0	0	1	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0043	1360	2	2	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0044	1384	2	0	0	2	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0045	1368	2	0	1	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0046	1379	2	0	1	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0047	1377	2	0	2	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0048	1373	2	0	0	0	2	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0049	1374	2	0	1	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0050	1356	2	2	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0051	1370	1	1	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0052	1343	1	1	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0053	1382	1	0	1	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0054	1380	1	0	1	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0055	1375	1	1	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0056	1373	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0057	1377	1	0	0	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0058	1370	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0059	1374	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0060	1382	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0061	1398	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0062	1392	1	0	1	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0063	1392	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0064	1369	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0065	1364	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0066	1358	1	1	0	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0067	1350	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0068	1375	1	0	0	1	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0069	1389	1	0	1	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0070	1379	1	0	0	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0071	1367	1	0	1	0	0	0	copy fasta	ARMC10	chr7	103070140	103104759
ARMC10_chr7_103070140_103104759	0/0	t0072	1358	1	0	0	0	0	1	copy fasta	ARMC10	chr7	103070140	103104759