| regionname | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
thapid | tlen | total | AFR | AMR | EAS | EUR | SAS | tseq | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
0/0 | t0029 | 7887 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0030 | 7885 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0031 | 7879 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0032 | 7847 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0033 | 7846 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0034 | 7847 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0035 | 7848 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0036 | 7848 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0037 | 7848 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0038 | 7849 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0039 | 7847 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0040 | 7847 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0041 | 7848 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0042 | 7848 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0043 | 7848 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0044 | 7848 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0045 | 7849 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0046 | 7849 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0047 | 7848 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0048 | 7848 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
1/0 | t0049 | 7848 | 1 | 0 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0050 | 7841 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0051 | 7843 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0052 | 7843 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0053 | 7843 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0054 | 7845 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0055 | 7847 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0056 | 7461 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0057 | 7450 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0058 | 7847 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0059 | 7847 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLC | chr1 | 149385621 | 149476833 |
|
0/0 | t0001 | 1265 | 107 | 2 | 14 | 75 | 4 | 12 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/1 | t0002 | 1265 | 27 | 0 | 2 | 19 | 1 | 4 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0003 | 1265 | 13 | 0 | 0 | 13 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0004 | 1256 | 3 | 0 | 0 | 0 | 0 | 3 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0005 | 1268 | 3 | 0 | 2 | 0 | 0 | 1 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0006 | 1265 | 2 | 0 | 0 | 1 | 0 | 1 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0007 | 1268 | 2 | 0 | 1 | 0 | 1 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
1/0 | t0008 | 1265 | 1 | 0 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0009 | 1265 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0010 | 1265 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0011 | 1265 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0012 | 1265 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0013 | 1265 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
0/0 | t0014 | 1268 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | NOTCH2NLR | chr1 | 120718945 | 120799851 |
|
1/1 | t0001 | 4010 | 61 | 13 | 13 | 15 | 3 | 15 | copy fasta | NOTCH2 | chr1 | 119906553 | 120074662 |
|
0/0 | t0002 | 4010 | 43 | 21 | 6 | 6 | 2 | 8 | copy fasta | NOTCH2 | chr1 | 119906553 | 120074662 |
|
0/0 | t0003 | 4013 | 21 | 8 | 2 | 5 | 0 | 6 | copy fasta | NOTCH2 | chr1 | 119906553 | 120074662 |
|
0/0 | t0004 | 4010 | 16 | 16 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2 | chr1 | 119906553 | 120074662 |
|
0/0 | t0005 | 4010 | 4 | 4 | 0 | 0 | 0 | 0 | copy fasta | NOTCH2 | chr1 | 119906553 | 120074662 |