JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
NRG1_chr8_32543311_32779046	0/0	t0054	10030	1	0	0	0	1	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0055	10031	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0056	10030	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0057	10030	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0058	10033	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0059	10030	1	0	0	0	0	1	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0060	10029	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0061	10031	1	0	0	0	1	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0062	10032	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0063	10032	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0064	10030	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0065	10031	1	0	0	0	0	1	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0066	10037	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0067	10029	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0068	10065	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0069	10030	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0070	10032	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0071	10031	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0072	10030	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0073	10028	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0074	10031	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0075	10033	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0076	10030	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0077	10061	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0078	10064	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0079	10029	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0080	10059	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0081	10059	1	0	0	0	0	1	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0082	10056	1	0	0	0	0	1	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0083	10058	1	0	0	0	1	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0084	10060	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0085	10030	1	0	0	0	0	1	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0086	10031	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0087	10035	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0088	10029	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0089	10033	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0090	10034	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0091	10033	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0092	10033	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0093	10056	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0094	10035	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0095	10037	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0096	10037	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0097	10032	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0098	10030	1	0	1	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0099	10036	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0100	10034	1	0	0	0	0	1	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0101	10036	1	0	0	1	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0102	10028	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046
NRG1_chr8_32543311_32779046	0/0	t0103	10038	1	1	0	0	0	0	copy fasta	NRG1	chr8	32543311	32779046