JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
NUAK1_chr12_106058345_106143954	0/0	t0037	3758	2	1	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0038	3756	2	0	0	2	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0039	3757	2	1	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0040	3759	2	0	0	2	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0041	3759	2	0	2	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0042	3758	2	1	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0043	3757	2	0	2	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0044	3756	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0045	3757	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0046	3767	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0047	3766	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0048	3764	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0049	3766	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0050	3767	1	0	0	0	1	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0051	3767	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0052	3766	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0053	3765	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0054	3766	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0055	3765	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0056	3767	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0057	3767	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0058	3766	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0059	3766	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0060	3757	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0061	3756	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0062	3758	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0063	3756	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0064	3755	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0065	3753	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0066	3758	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0067	3759	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0068	3758	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0069	3757	1	0	1	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0070	3757	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0071	3758	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0072	3759	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0073	3759	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0074	3758	1	0	0	0	1	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0075	3760	1	0	0	0	1	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0076	3758	1	0	0	0	1	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0077	3758	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0078	3757	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0079	3757	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0080	3755	1	1	0	0	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0081	3759	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0082	3757	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0083	3754	1	0	0	0	1	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0084	3759	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0085	3757	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954
NUAK1_chr12_106058345_106143954	0/0	t0086	3758	1	0	0	1	0	copy fasta	NUAK1	chr12	106058345	106143954