JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
NUDT3_chr6_34274679_34397669	0/0	t0028	9378	2	0	0	2	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0029	9379	2	0	0	0	0	2	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0030	9377	2	0	0	2	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0031	9383	2	0	1	0	1	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0032	9383	2	2	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0033	9382	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0034	9387	1	0	0	0	1	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0035	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0036	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0037	9379	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0038	9382	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0039	9356	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0040	9387	1	0	0	0	0	1	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0041	9385	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0042	9382	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0043	9382	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0044	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0045	9379	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0046	9380	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0047	9378	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0048	9376	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0049	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0050	9379	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0051	9375	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0052	9380	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0053	9378	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0054	9378	1	0	0	0	0	1	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0055	9379	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0056	9379	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0057	9379	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0058	9384	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0059	9382	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0060	9380	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0061	9380	1	0	0	0	0	1	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0062	9379	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0063	9380	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0064	9381	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0065	9382	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0066	9382	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0067	9378	1	0	0	0	0	1	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0068	9379	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0069	9379	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0070	9379	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0071	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0072	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0073	9381	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0074	9378	1	0	0	1	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0075	9378	1	0	1	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0076	9377	1	1	0	0	0	0	copy fasta	NUDT3	chr6	34274679	34397669
NUDT3_chr6_34274679_34397669	0/0	t0077	9379	1	0	0	0	0	1	copy fasta	NUDT3	chr6	34274679	34397669