JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
NUDT4_chr12_93372925_93413146	0/0	t0056	9162	2	2	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0057	9173	2	2	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0058	9164	2	2	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0059	9166	2	0	0	2	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0060	9169	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0061	9169	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0062	9167	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0063	9170	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0064	9168	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0065	9197	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0066	9170	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0067	9149	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0068	9165	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0069	9167	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0070	9167	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0071	9168	1	0	0	0	0	1	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0072	9171	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0073	9174	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0074	9168	1	0	0	0	0	1	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0075	9171	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0076	9174	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0077	9173	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0078	9172	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0079	9169	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0080	9164	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0081	9163	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0082	9170	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0083	9155	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0084	9155	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0085	9170	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0086	9169	1	0	0	0	0	1	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0087	9190	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0088	9170	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0089	9165	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0090	9168	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0091	9164	1	0	0	0	1	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0092	9166	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0093	9166	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0094	9165	1	0	0	0	0	1	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0095	9165	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0096	9166	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0097	9170	1	1	0	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0098	9165	1	0	0	0	0	1	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0099	9207	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0100	9189	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0101	9169	1	0	0	0	0	1	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0102	9169	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0103	9164	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0104	9166	1	0	0	1	0	0	copy fasta	NUDT4	chr12	93372925	93413146
NUDT4_chr12_93372925_93413146	0/0	t0105	9168	1	0	1	0	0	0	copy fasta	NUDT4	chr12	93372925	93413146