Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ARSB_chr5_78772209_78990310	0/0	t0009	3253	11	0	2	9	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0010	3250	8	0	2	3	1	2	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0011	3251	8	0	0	8	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0012	3251	7	4	2	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0013	3252	7	1	1	5	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0014	3252	5	0	2	2	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0015	3252	5	0	0	3	0	2	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0016	3253	5	3	0	0	1	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0017	3253	5	4	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0018	3250	4	3	0	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0019	3251	4	0	0	4	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0020	3251	3	0	0	3	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0021	3251	3	0	0	3	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0022	3251	3	2	0	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0023	3252	3	0	2	0	1	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0024	3252	3	0	2	0	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0025	3251	3	0	1	2	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0026	3252	2	0	1	0	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0027	3254	2	2	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0028	3254	2	2	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0029	3251	2	0	0	0	0	2	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0030	3253	2	0	0	2	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0031	3252	2	2	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0032	3251	2	1	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0033	3252	2	0	2	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0034	3252	2	2	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0035	3254	2	2	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0036	3252	2	2	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0037	3253	1	0	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0038	3251	1	0	0	0	1	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0039	3252	1	0	0	0	1	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0040	3251	1	0	0	0	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0041	3253	1	0	0	0	1	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0042	3252	1	0	0	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0043	3253	1	0	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0044	3254	1	1	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0045	3251	1	0	0	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0046	3251	1	0	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0047	3252	1	0	0	0	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0048	3251	1	1	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0049	3251	1	1	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0050	3252	1	0	0	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0051	3250	1	0	0	1	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0052	3251	1	1	0	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0053	3251	1	0	0	0	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0054	3252	1	0	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0055	3253	1	0	0	0	0	1	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0056	3253	1	0	0	0	1	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0057	3254	1	0	1	0	0	0	copy fasta	ARSB	chr5	78772209	78990310
ARSB_chr5_78772209_78990310	0/0	t0058	3251	1	0	0	0	0	1	copy fasta	ARSB	chr5	78772209	78990310