JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
OR10A6_chr11_7919592_7936268	0/0	t0151	5084	1	0	0	0	1	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0152	5112	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0153	5118	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0154	5110	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0155	5106	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0156	5137	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0157	5137	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0158	5135	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0159	5125	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0160	5117	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0161	5153	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0162	5157	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0163	5153	1	0	0	0	1	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0164	5151	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0165	5149	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0166	5143	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0167	5105	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0168	5097	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0169	5137	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0170	5109	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0171	5095	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0172	5107	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0173	5135	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0174	5141	1	0	0	0	0	1	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0175	5143	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0176	5135	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/1	t0177	5143	1	0	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0178	5155	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0179	5147	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0180	5145	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0181	5143	1	0	0	0	1	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0182	5153	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0183	5151	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0184	5143	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0185	5151	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0186	5149	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0187	5139	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0188	5139	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0189	5141	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0190	5139	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0191	5155	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0192	5153	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0193	5153	1	0	1	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0194	5151	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0195	5147	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0196	5141	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0197	5141	1	1	0	0	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0198	5159	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0199	5161	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268
OR10A6_chr11_7919592_7936268	0/0	t0200	5159	1	0	0	1	0	0	copy fasta	OR10A6	chr11	7919592	7936268