JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
OXA1L_chr14_22761688_22778042	0/0	t0092	1491	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0093	1482	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0094	1484	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0095	1500	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0096	1492	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0097	1483	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0098	1499	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0099	1482	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0100	1497	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0101	1494	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0102	1481	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0103	1506	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0104	1499	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0105	1494	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0106	1500	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0107	1499	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0108	1496	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0109	1492	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0110	1492	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0111	1491	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0112	1498	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0113	1491	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0114	1490	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0115	1496	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0116	1482	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0117	1480	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0118	1497	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0119	1493	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0120	1481	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0121	1500	1	1	0	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0122	1500	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0123	1482	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0124	1502	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0125	1485	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0126	1500	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0127	1498	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0128	1482	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0129	1498	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0130	1483	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0131	1482	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0132	1500	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0133	1497	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0134	1495	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0135	1491	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0136	1483	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0137	1481	1	0	1	0	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0138	1482	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0139	1485	1	0	0	0	1	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0140	1482	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042
OXA1L_chr14_22761688_22778042	0/0	t0141	1483	1	0	0	1	0	copy fasta	OXA1L	chr14	22761688	22778042