JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
P2RY14_chr3_151207117_151283542	0/0	t0014	1572	1	1	0	0	0	0	copy fasta	P2RY14	chr3	151207117	151283542
P2RY14_chr3_151207117_151283542	0/0	t0015	1572	1	1	0	0	0	0	copy fasta	P2RY14	chr3	151207117	151283542
P2RY14_chr3_151207117_151283542	0/0	t0016	1572	1	0	1	0	0	0	copy fasta	P2RY14	chr3	151207117	151283542
P2RY14_chr3_151207117_151283542	0/0	t0017	1578	1	0	0	0	0	1	copy fasta	P2RY14	chr3	151207117	151283542
P2RY1_chr3_152830131_152846439	1/1	t0001	5188	150	22	32	69	4	21	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0002	5184	43	3	6	29	2	3	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0003	5186	21	11	5	4	0	1	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0004	5190	17	1	4	9	0	3	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0005	5184	17	9	2	6	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0006	5190	15	0	4	5	0	6	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0007	5188	10	0	7	0	2	1	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0008	5186	8	6	0	2	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0009	5184	6	0	0	5	1	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0010	5186	5	0	0	5	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0011	5184	5	0	0	5	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0012	5182	5	0	4	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0013	5188	5	5	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0014	5184	4	4	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0015	5187	4	4	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0016	5187	4	4	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0017	5182	4	4	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0018	5184	3	3	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0019	5186	3	0	0	0	0	3	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0020	5182	3	3	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0021	5188	3	3	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0022	5188	2	0	2	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0023	5188	2	1	1	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0024	5186	2	2	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0025	5188	2	1	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0026	5188	2	2	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0027	5184	1	0	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0028	5184	1	0	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0029	5182	1	0	1	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0030	5186	1	0	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0031	5182	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0032	5188	1	0	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0033	5188	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0034	5188	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0035	5188	1	0	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0036	5186	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0037	5188	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0038	5200	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0039	5206	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0040	5190	1	0	1	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0041	5188	1	1	0	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0042	5188	1	0	0	0	0	1	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0043	5188	1	0	0	0	1	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0044	5188	1	0	0	0	0	1	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0045	5190	1	0	0	1	0	0	copy fasta	P2RY1	chr3	152830131	152846439
P2RY1_chr3_152830131_152846439	0/0	t0046	5188	1	0	1	0	0	0	copy fasta	P2RY1	chr3	152830131	152846439