Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ATP10B_chr5_160558120_160857211	1/0	t0004	3180	18	3	3	6	2	3	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0005	3180	14	2	10	1	1	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0006	3180	12	1	2	3	1	5	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0007	3180	11	6	2	3	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0008	3180	11	4	1	5	1	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0009	3180	8	3	3	1	0	1	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/1	t0010	3180	7	1	2	0	1	2	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0011	3180	7	3	0	4	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0012	3180	4	3	0	1	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0013	3180	3	3	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0014	3180	3	0	1	0	0	2	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0015	3180	2	2	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0016	3180	2	0	1	0	1	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0017	3180	2	2	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0018	3180	2	0	0	2	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0019	3180	2	2	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0020	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0021	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0022	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0023	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0024	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0025	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0026	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0027	3180	1	0	0	1	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0028	3180	1	0	0	0	1	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0029	3180	1	0	0	1	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0030	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0031	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0032	3180	1	0	0	0	0	1	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0033	3180	1	0	0	0	0	1	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0034	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0035	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0036	3180	1	0	0	0	1	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0037	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0038	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0039	3180	1	0	0	1	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0040	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0041	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0042	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0043	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0044	3180	1	0	0	1	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0045	3180	1	0	1	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0046	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0047	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0048	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0049	3180	1	0	0	0	0	1	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0050	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0051	3180	1	0	1	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0052	3180	1	0	1	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211
ATP10B_chr5_160558120_160857211	0/0	t0053	3180	1	1	0	0	0	0	copy fasta	ATP10B	chr5	160558120	160857211