JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
PRRG3_chrX_151690458_151710924	0/0	t0095	4995	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0096	4994	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0097	4993	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0098	4992	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0099	4995	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0100	4997	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0101	4986	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0102	4991	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0103	4999	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0104	5003	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0105	4988	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0106	4989	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0107	4993	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0108	4995	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0109	4994	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0110	4998	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0111	4998	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0112	5006	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0113	5007	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	1/0	t0114	5010	1	0	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0115	4984	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0116	4977	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0117	4992	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0118	4997	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0119	4982	1	0	0	0	1	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0120	4982	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0121	4983	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0122	4987	1	1	0	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0123	4978	1	0	0	0	0	1	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0124	4981	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0125	4979	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0126	4981	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0127	4980	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0128	4984	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0129	4983	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0130	4983	1	0	0	0	0	1	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0131	4983	1	0	0	0	0	1	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0132	4983	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0133	4985	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0134	4985	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0135	4987	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0136	4989	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0137	4980	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0138	4984	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0139	4984	1	0	0	0	0	1	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0140	4986	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0141	4986	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0142	4988	1	0	0	1	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0143	4979	1	0	1	0	0	0	copy fasta	PRRG3	chrX	151690458	151710924
PRRG3_chrX_151690458_151710924	0/0	t0144	4983	1	0	0	0	0	1	copy fasta	PRRG3	chrX	151690458	151710924