JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
RAB3IP_chr12_69733860_69828199	0/0	t0069	7951	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0070	7949	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0071	7944	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0072	7944	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0073	7943	1	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0074	7945	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0075	7944	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0076	7972	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0077	7968	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0078	7970	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0079	7972	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0080	7971	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0081	7969	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0082	7967	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0083	7966	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0084	7966	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0085	7963	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0086	7963	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0087	7961	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0088	7981	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0089	7979	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0090	7975	1	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0091	7972	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0092	7970	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0093	7972	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0094	7972	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0095	7971	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0096	7970	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0097	7968	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0098	7969	1	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0099	7969	1	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0100	7968	1	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0101	7968	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0102	7968	1	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0103	7966	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0104	7966	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0105	7964	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0106	7961	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0107	7953	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0108	7952	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0109	7952	1	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0110	7956	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0111	7950	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0112	7948	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0113	7970	1	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0114	7973	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0115	7971	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0116	7966	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0117	7967	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0118	7979	1	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199