JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RAB3IP_chr12_69733860_69828199	0/0	t0119	7977	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0120	7972	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0121	7952	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0122	7952	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0123	7951	1	0	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0124	7948	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0125	7949	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0126	7947	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0127	7946	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0128	7949	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0129	7974	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0130	7973	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0131	7966	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0132	7949	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0133	7948	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0134	7954	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0135	7954	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0136	7954	1	0	0	0	1	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0137	7970	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0138	7971	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0139	7969	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0140	7977	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0141	7986	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0142	7984	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0143	7984	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0144	7982	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0145	7981	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0146	7980	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0147	7979	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0148	7975	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0149	7971	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0150	7970	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0151	7969	1	0	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0152	7970	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0153	7969	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0154	7968	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0155	7967	1	0	1	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0156	7964	1	0	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0157	7971	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0158	7967	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0159	7969	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0160	7969	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0161	7967	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0162	7964	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0163	7961	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0164	7961	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0165	7959	1	0	0	0	0	1	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0166	7957	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0167	7962	1	1	0	0	0	0	copy fasta	RAB3IP	chr12	69733860	69828199
RAB3IP_chr12_69733860_69828199	0/0	t0168	7974	1	0	0	1	0	0	copy fasta	RAB3IP	chr12	69733860	69828199