JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RBM23_chr14_22888204_22924149	0/0	t0004	8690	10	1	9	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0005	8687	9	0	0	9	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0006	8688	7	7	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0007	8689	6	6	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0008	8688	5	4	1	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0009	8689	5	5	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0010	8687	4	3	1	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0011	8689	4	2	1	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0012	8687	4	4	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0013	8688	4	0	0	2	0	2	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0014	8688	4	4	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0015	8689	4	0	2	0	2	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0016	8689	4	4	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0017	8685	4	3	1	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0018	8686	4	4	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0019	8689	3	3	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0020	8688	3	2	1	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0021	8687	3	0	3	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0022	8689	3	0	0	2	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0023	8687	3	0	0	3	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0024	8689	3	3	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	1/0	t0025	8688	3	0	1	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0026	8692	3	0	2	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0027	8689	3	0	0	3	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0028	8690	3	3	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0029	8689	3	3	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0030	8687	2	2	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0031	8689	2	0	1	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0032	8689	2	2	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0033	8687	2	0	0	2	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0034	8687	2	0	0	0	0	2	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0035	8687	2	0	2	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0036	8689	2	0	2	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0037	8689	2	0	0	2	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0038	8687	2	2	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0039	8687	2	0	0	2	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0040	8689	2	0	0	0	2	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0041	8689	1	1	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0042	8688	1	1	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0043	8689	1	0	0	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0044	8689	1	1	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0045	8688	1	1	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0046	8689	1	0	1	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0047	8689	1	1	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0048	8687	1	0	0	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0049	8687	1	0	0	1	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0050	8687	1	0	0	1	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0051	8687	1	0	0	1	0	0	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0052	8689	1	0	0	0	0	1	copy fasta	RBM23	chr14	22888204	22924149
RBM23_chr14_22888204_22924149	0/0	t0053	8689	1	1	0	0	0	0	copy fasta	RBM23	chr14	22888204	22924149