JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
RBM28_chr7_128292685_128348908	0/0	t0103	13241	1	0	0	0	0	1	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0104	13241	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0105	13230	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0106	13239	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0107	13237	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0108	13236	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0109	13238	1	0	0	0	0	1	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0110	13239	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0111	13242	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0112	13237	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0113	13565	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0114	13235	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0115	13235	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0116	13236	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0117	13236	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0118	13234	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0119	13236	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0120	13235	1	0	0	0	1	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0121	13236	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0122	13236	1	0	0	0	1	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0123	13237	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0124	13237	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0125	13237	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0126	13234	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0127	13238	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0128	13236	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0129	13236	1	0	1	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0130	13236	1	0	0	0	1	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0131	13236	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0132	13234	1	0	0	1	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM28_chr7_128292685_128348908	0/0	t0133	13236	1	1	0	0	0	0	copy fasta	RBM28	chr7	128292685	128348908
RBM33_chr7_155639661_155786480	0/0	t0001	6667	28	1	5	15	1	6	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0002	6667	24	2	5	8	2	7	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0003	6656	12	3	3	6	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0004	6656	12	3	2	4	2	1	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0005	6656	12	11	1	0	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0006	6667	12	0	1	8	0	3	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0007	6656	11	1	2	6	1	1	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0008	6667	8	0	2	5	0	1	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0009	6656	7	0	1	3	2	1	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0010	6656	7	0	0	7	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0011	6667	6	0	0	6	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0012	6667	6	0	0	6	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0013	6656	5	0	0	5	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	1/0	t0014	6656	5	0	3	0	0	1	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0015	6667	4	0	0	4	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0016	6656	4	0	2	2	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0017	6668	4	0	0	2	0	2	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0018	6667	4	0	3	1	0	0	copy fasta	RBM33	chr7	155639661	155786480
RBM33_chr7_155639661_155786480	0/0	t0019	6656	3	3	0	0	0	0	copy fasta	RBM33	chr7	155639661	155786480